Get epidemiological curves from model data

Get epidemiological curves from model data

Usage

get_epicurve_data(dt, disease_tags = "default", format = c("long", "wide"))

Arguments

dt

A <data.table> resulting from run_scenarios().

disease_tags

A character vector giving names for replicates within each scenario.

format

A string for whether the data should be returned in "long" or "wide" format. Returning a 'wide' data.frame is only recommended when there is a small number of disease_tags, typically a triplet of "low", "medium", and "high" risk scenarios.

Value

A <data.frame> of individuals in each epidemiological compartments over the timeframe of the modelled epidemics.